STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83568.1Identified by match to protein family HMM PF01547. (440 aa)    
Predicted Functional Partners:
AEF86108.1
Sugar permease; Identified by match to protein family HMM PF00528.
 
   0.944
AEF84978.1
ABC-type sugar transport system, permease component; Identified by match to protein family HMM PF00528.
 
   0.943
malQ
4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.
 
     0.625
AEF85667.1
Multiple sugar-binding transport ATP-binding protein MsmK; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.521
AEF85535.1
Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.521
AEF84772.1
Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.521
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.499
AEF85611.1
Sugar ABC transporter permease; Identified by match to protein family HMM PF00528.
  
   0.488
AEF84884.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
   0.488
AEF84962.1
Sugar ABC transporter permease; Identified by match to protein family HMM PF00528.
  
   0.488
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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