Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83555.1 | AEF84610.1 | TREPR_2626 | TREPR_0241 | Transcriptional regulator. | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | 0.637 |
| AEF83626.1 | AEF84610.1 | TREPR_0242 | TREPR_0241 | Putative RNA nucleotidyltransferase; Identified by match to protein family HMM TIGR00277. | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | 0.559 |
| AEF83626.1 | AEF85120.1 | TREPR_0242 | TREPR_0240 | Putative RNA nucleotidyltransferase; Identified by match to protein family HMM TIGR00277. | 4-alpha-glucanotransferase (Amylomaltase)(Disproportionating enzyme) (D-enzyme); Identified by match to protein family HMM PF02446. | 0.548 |
| AEF83996.1 | AEF84610.1 | TREPR_0237 | TREPR_0241 | Conserved hypothetical protein; Identified by match to protein family HMM PF01988. | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | 0.505 |
| AEF83996.1 | AEF85120.1 | TREPR_0237 | TREPR_0240 | Conserved hypothetical protein; Identified by match to protein family HMM PF01988. | 4-alpha-glucanotransferase (Amylomaltase)(Disproportionating enzyme) (D-enzyme); Identified by match to protein family HMM PF02446. | 0.516 |
| AEF83996.1 | AEF86112.1 | TREPR_0237 | TREPR_0239 | Conserved hypothetical protein; Identified by match to protein family HMM PF01988. | Identified by match to protein family HMM PF07556. | 0.773 |
| AEF83996.1 | AEF86543.1 | TREPR_0237 | TREPR_0238 | Conserved hypothetical protein; Identified by match to protein family HMM PF01988. | Conserved hypothetical protein. | 0.773 |
| AEF84610.1 | AEF83555.1 | TREPR_0241 | TREPR_2626 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Transcriptional regulator. | 0.637 |
| AEF84610.1 | AEF83626.1 | TREPR_0241 | TREPR_0242 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Putative RNA nucleotidyltransferase; Identified by match to protein family HMM TIGR00277. | 0.559 |
| AEF84610.1 | AEF83996.1 | TREPR_0241 | TREPR_0237 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Conserved hypothetical protein; Identified by match to protein family HMM PF01988. | 0.505 |
| AEF84610.1 | AEF85062.1 | TREPR_0241 | TREPR_1564 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Putative amino acid transporter; Identified by match to protein family HMM PF00324. | 0.918 |
| AEF84610.1 | AEF85120.1 | TREPR_0241 | TREPR_0240 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | 4-alpha-glucanotransferase (Amylomaltase)(Disproportionating enzyme) (D-enzyme); Identified by match to protein family HMM PF02446. | 0.896 |
| AEF84610.1 | AEF86112.1 | TREPR_0241 | TREPR_0239 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Identified by match to protein family HMM PF07556. | 0.532 |
| AEF84610.1 | AEF86532.1 | TREPR_0241 | TREPR_2954 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.867 |
| AEF84610.1 | AEF86543.1 | TREPR_0241 | TREPR_0238 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Conserved hypothetical protein. | 0.505 |
| AEF84610.1 | glgA | TREPR_0241 | TREPR_2124 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.811 |
| AEF84610.1 | glgX | TREPR_0241 | TREPR_0838 | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | Glycogen debranching enzyme GlgX; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; Belongs to the glycosyl hydrolase 13 family. | 0.498 |
| AEF85062.1 | AEF84610.1 | TREPR_1564 | TREPR_0241 | Putative amino acid transporter; Identified by match to protein family HMM PF00324. | Alpha amylase catalytic region; Identified by match to protein family HMM PF00128. | 0.918 |
| AEF85062.1 | AEF86532.1 | TREPR_1564 | TREPR_2954 | Putative amino acid transporter; Identified by match to protein family HMM PF00324. | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.445 |
| AEF85120.1 | AEF83626.1 | TREPR_0240 | TREPR_0242 | 4-alpha-glucanotransferase (Amylomaltase)(Disproportionating enzyme) (D-enzyme); Identified by match to protein family HMM PF02446. | Putative RNA nucleotidyltransferase; Identified by match to protein family HMM TIGR00277. | 0.548 |
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