STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86965.1Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family. (84 aa)    
Predicted Functional Partners:
AEF84232.1
Uba/ThiF-type NAD/FAD-binding protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
 
   
 0.935
AEF86601.1
Nitrite/sulfite reductase, 4Fe-4S iron-sulfur cluster-binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
   
 0.920
thiS
Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.
 
 
 
 0.812
AEF86814.1
Mov34/MPN/PAD-1; Identified by match to protein family HMM PF01398.
 
     0.773
AEF86027.1
Identified by match to protein family HMM PF02597.
 
 
 0.769
iscS
Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
   
 
 0.744
AEF85229.1
Cysteine desulfurase; Identified by match to protein family HMM PF00266.
   
 
 0.744
AEF84316.1
Mov34/MPN/PAD-1.
 
     0.717
AEF83626.1
Putative RNA nucleotidyltransferase; Identified by match to protein family HMM TIGR00277.
       0.527
AEF86955.1
Uba/ThiF-type NAD/FAD-binding protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
 
   
 0.510
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.