STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84558.1Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (321 aa)    
Predicted Functional Partners:
AEF85478.1
Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532.
 0.992
AEF84928.1
Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005.
 0.992
AEF85851.1
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
 0.977
rbsA-2
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.974
AEF85328.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.911
AEF85784.1
Hypothetical protein; Identified by glimmer; putative.
 
 0.910
AEF85806.1
Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005.
 
 0.882
AEF83707.1
Putative sugar ABC-transporter, sugar-binding protein.
 
 
 0.881
AEF85805.1
Galactose/methyl galactoside import ATP-binding protein MglA; Identified by match to protein family HMM PF00005.
 
 0.865
AEF85191.1
Xylose import ATP-binding protein XylG; Identified by match to protein family HMM PF00005.
 
 0.842
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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