Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83740.1 | AEF84558.1 | TREPR_0271 | TREPR_0267 | Conserved hypothetical protein. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.517 |
| AEF83740.1 | AEF84928.1 | TREPR_0271 | TREPR_0268 | Conserved hypothetical protein. | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.543 |
| AEF83740.1 | AEF85478.1 | TREPR_0271 | TREPR_0266 | Conserved hypothetical protein. | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | 0.413 |
| AEF83740.1 | AEF86863.1 | TREPR_0271 | TREPR_0270 | Conserved hypothetical protein. | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.773 |
| AEF84558.1 | AEF83740.1 | TREPR_0267 | TREPR_0271 | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Conserved hypothetical protein. | 0.517 |
| AEF84558.1 | AEF84928.1 | TREPR_0267 | TREPR_0268 | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.992 |
| AEF84558.1 | AEF85478.1 | TREPR_0267 | TREPR_0266 | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | 0.992 |
| AEF84558.1 | AEF86863.1 | TREPR_0267 | TREPR_0270 | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.517 |
| AEF84928.1 | AEF83740.1 | TREPR_0268 | TREPR_0271 | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.543 |
| AEF84928.1 | AEF84558.1 | TREPR_0268 | TREPR_0267 | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.992 |
| AEF84928.1 | AEF85478.1 | TREPR_0268 | TREPR_0266 | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | 0.980 |
| AEF84928.1 | AEF86863.1 | TREPR_0268 | TREPR_0270 | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.543 |
| AEF85478.1 | AEF83740.1 | TREPR_0266 | TREPR_0271 | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | Conserved hypothetical protein. | 0.413 |
| AEF85478.1 | AEF84558.1 | TREPR_0266 | TREPR_0267 | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.992 |
| AEF85478.1 | AEF84928.1 | TREPR_0266 | TREPR_0268 | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.980 |
| AEF85478.1 | AEF86863.1 | TREPR_0266 | TREPR_0270 | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.414 |
| AEF86863.1 | AEF83740.1 | TREPR_0270 | TREPR_0271 | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Conserved hypothetical protein. | 0.773 |
| AEF86863.1 | AEF84558.1 | TREPR_0270 | TREPR_0267 | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.517 |
| AEF86863.1 | AEF84928.1 | TREPR_0270 | TREPR_0268 | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.543 |
| AEF86863.1 | AEF85478.1 | TREPR_0270 | TREPR_0266 | RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532. | 0.414 |