STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83768.12-dehydro-3-deoxyglucarate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. (254 aa)    
Predicted Functional Partners:
AEF86234.1
2-keto-4-pentenoate hydratase (2-hydroxypentadienoic acidhydratase); Identified by match to protein family HMM PF01689.
  
 0.935
AEF86603.1
YbaK/prolyl-tRNA synthetase associated region; Identified by match to protein family HMM PF04073.
       0.727
AEF87035.1
2-hydroxy-3-oxopropionate reductase; Identified by match to protein family HMM PF03446; match to protein family HMM TIGR01505.
 
 
 0.719
AEF85393.1
Hypothetical protein; Identified by glimmer; putative.
       0.608
AEF83570.1
Putative lipoprotein.
       0.503
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.462
AEF83881.1
Putative acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily; Identified by match to protein family HMM PF03417.
  
     0.452
AEF86149.1
Sulfate/thiosulfate import ATP-binding protein CysA 2 (Sulfate-transporting ATPase 2); Identified by match to protein family HMM PF00005.
       0.406
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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