STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83601.1Peptidase, M48 family; Identified by match to protein family HMM PF01435. (306 aa)    
Predicted Functional Partners:
AEF87004.1
Conserved hypothetical protein.
 
    0.916
AEF83769.1
Biopolymer transport protein; Identified by match to protein family HMM PF01618.
 
    0.634
AEF84702.1
Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226.
 
     0.622
AEF85979.1
RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.550
AEF84990.1
Aldo/keto reductase; Identified by match to protein family HMM PF00248.
       0.517
AEF84723.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
   
 0.507
AEF84058.1
Identified by match to protein family HMM PF00753; match to protein family HMM PF07521.
       0.492
AEF85224.1
Putative vitamin B12 transporter BtuB (Cobalamin receptor) (Outermembrane cobalamin translocator); Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.470
AEF87033.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.451
AEF85008.1
Putative membrane fusion protein; Identified by match to protein family HMM PF00364; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.447
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.