STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85023.1Conserved hypothetical protein. (227 aa)    
Predicted Functional Partners:
AEF85429.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08843.
 
   
 0.952
AEF83764.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08843.
 
   
 0.798
AEF86143.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08843.
 
   
 0.798
AEF86565.1
Conserved hypothetical protein.
  
     0.774
AEF84046.1
Putative virulence protein.
       0.541
AEF84701.1
Identified by match to protein family HMM PF01850.
       0.541
AEF86423.1
Identified by match to protein family HMM PF01909.
  
    0.403
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.