STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84328.1Polysaccharide biosynthesis/export protein; Identified by match to protein family HMM PF02563. (507 aa)    
Predicted Functional Partners:
AEF86776.1
Putative lipopolysaccharide biosynthesis; Identified by match to protein family HMM PF02706.
 
  
 0.878
AEF85967.1
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
  
 0.878
AEF86032.1
Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706.
 
  
 0.876
AEF83794.1
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.853
AEF86428.1
Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
  
  
 0.850
AEF85357.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.619
AEF85696.1
Identified by match to protein family HMM PF02878.
 
   
 0.612
AEF86261.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  
 0.600
AEF86126.1
Teichoic acids export ATP-binding protein TagH (Teichoicacid-transporting ATPase); Identified by match to protein family HMM PF00005.
  
  
 0.600
AEF84641.1
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
  
  
 0.599
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.