Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84149.1 | AEF84522.1 | TREPR_0372 | TREPR_2791 | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. | 0.443 |
| AEF84149.1 | AEF85228.1 | TREPR_0372 | TREPR_0371 | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.554 |
| AEF84149.1 | AEF85622.1 | TREPR_0372 | TREPR_0370 | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | Identified by match to protein family HMM PF00881. | 0.428 |
| AEF84149.1 | metA | TREPR_0372 | TREPR_0373 | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.620 |
| AEF84149.1 | ogt | TREPR_0372 | TREPR_2311 | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | methylated-DNA--[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.770 |
| AEF84149.1 | polA | TREPR_0372 | TREPR_3060 | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.637 |
| AEF84522.1 | AEF84149.1 | TREPR_2791 | TREPR_0372 | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | 0.443 |
| AEF84522.1 | AEF85228.1 | TREPR_2791 | TREPR_0371 | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.478 |
| AEF84522.1 | metA | TREPR_2791 | TREPR_0373 | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.980 |
| AEF85228.1 | AEF84149.1 | TREPR_0371 | TREPR_0372 | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | 0.554 |
| AEF85228.1 | AEF84522.1 | TREPR_0371 | TREPR_2791 | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. | 0.478 |
| AEF85228.1 | AEF85622.1 | TREPR_0371 | TREPR_0370 | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | Identified by match to protein family HMM PF00881. | 0.564 |
| AEF85228.1 | metA | TREPR_0371 | TREPR_0373 | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.454 |
| AEF85622.1 | AEF84149.1 | TREPR_0370 | TREPR_0372 | Identified by match to protein family HMM PF00881. | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | 0.428 |
| AEF85622.1 | AEF85228.1 | TREPR_0370 | TREPR_0371 | Identified by match to protein family HMM PF00881. | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.564 |
| metA | AEF84149.1 | TREPR_0373 | TREPR_0372 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | 0.620 |
| metA | AEF84522.1 | TREPR_0373 | TREPR_2791 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657. | 0.980 |
| metA | AEF85228.1 | TREPR_0373 | TREPR_0371 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.454 |
| ogt | AEF84149.1 | TREPR_2311 | TREPR_0372 | methylated-DNA--[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | DNA-3-methyladenine glycosylase 1; Identified by match to protein family HMM PF03352. | 0.770 |
| ogt | polA | TREPR_2311 | TREPR_3060 | methylated-DNA--[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.539 |
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