Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEF84742.1Probable malonic semialdehyde oxidative decarboxylase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family. (625 aa)    
Predicted Functional Partners:
AEF84724.1
Myo-inositol catabolism protein; Identified by match to protein family HMM PF06845.
 
 
 0.999
AEF85292.1
Myo-inositol catabolism protein IolE; Identified by match to protein family HMM PF01261.
 
 
 0.997
AEF83751.1
Inositol 2-dehydrogenase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.933
AEF85943.1
Xylose isomerase domain protein TIM barrel; Identified by match to protein family HMM PF01261.
 
  
 0.871
AEF84999.1
Inositol 2-dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447.
 
  
 0.849
pgk_2
Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
       0.767
AEF86861.1
Oxidoreductase domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.697
AEF83705.1
Glyceraldehyde-3-phosphate dehydrogenase, type II; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01546.
 
     0.649
ilvB
Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; Belongs to the TPP enzyme family.
  
  
 
0.576
fba
Fructose-1,6-bisphosphate aldolase, class II; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859.
  
  
 0.535
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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