Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEF85328.1Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (333 aa)    
Predicted Functional Partners:
AEF85851.1
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
 0.992
rbsA-2
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.991
AEF85478.1
Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532.
 0.982
AEF84928.1
Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005.
 0.975
AEF84558.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.911
AEF83707.1
Putative sugar ABC-transporter, sugar-binding protein.
 
 
 0.893
AEF85806.1
Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005.
 
 0.887
AEF85805.1
Galactose/methyl galactoside import ATP-binding protein MglA; Identified by match to protein family HMM PF00005.
 
 0.873
AEF85191.1
Xylose import ATP-binding protein XylG; Identified by match to protein family HMM PF00005.
 
 0.856
AEF86391.1
D-galactose-binding periplasmic protein (gbp) (d-galactose/d-glucose-binding protein) (ggbp).
 
 
 0.825
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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