STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85804.1Taurine import ATP-binding protein TauB; Identified by match to protein family HMM PF00005. (267 aa)    
Predicted Functional Partners:
AEF86183.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.976
AEF84268.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.975
AEF84789.1
NMT1/THI5 domain protein; Identified by match to protein family HMM PF09084.
 
  
 0.922
AEF85461.1
Taurine ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.895
AEF83647.1
Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528.
  
 0.892
AEF86052.1
Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.852
AEF85842.1
Dihydroorotate oxidase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037.
 
     0.746
hydA
Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033.
 
     0.717
AEF86278.1
Putative lipoprotein.
 
  
 0.717
AEF85248.1
Adenosylmethionine--8-amino-7-oxononanoate transaminase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.706
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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