STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84677.1Hypothetical protein; Identified by glimmer; putative. (132 aa)    
Predicted Functional Partners:
AEF85936.1
Hypothetical protein; Identified by glimmer; putative.
       0.781
AEF85582.1
Nitroreductase; Identified by match to protein family HMM PF00881.
       0.576
AEF84357.1
Branched-chain amino acid transport ATP-binding protein LivG; Identified by match to protein family HMM PF00005.
       0.517
AEF86682.1
High affinity branched-chain amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.517
AEF85243.1
Putative inner-membrane translocator; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
       0.517
AEF84106.1
Putative inner-membrane translocator; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
       0.517
AEF83623.1
Identified by match to protein family HMM PF01094.
       0.517
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.