Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84295.1 | AEF86864.1 | TREPR_0224 | TREPR_0456 | Identified by match to protein family HMM PF00903. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.800 |
| AEF84295.1 | AEF86887.1 | TREPR_0224 | TREPR_1352 | Identified by match to protein family HMM PF00903. | Hypothetical protein; Identified by glimmer; putative. | 0.801 |
| AEF84295.1 | trpA | TREPR_0224 | TREPR_0388 | Identified by match to protein family HMM PF00903. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.800 |
| AEF84295.1 | trpB | TREPR_0224 | TREPR_0387 | Identified by match to protein family HMM PF00903. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.817 |
| AEF84332.1 | AEF86864.1 | TREPR_0455 | TREPR_0456 | Identified by match to protein family HMM PF01694. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.550 |
| AEF85146.1 | AEF86726.1 | TREPR_3600 | TREPR_3719 | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | 0.909 |
| AEF85146.1 | AEF86864.1 | TREPR_3600 | TREPR_0456 | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.800 |
| AEF85146.1 | AEF86887.1 | TREPR_3600 | TREPR_1352 | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | Hypothetical protein; Identified by glimmer; putative. | 0.911 |
| AEF85146.1 | thrH | TREPR_3600 | TREPR_3042 | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR02137. | 0.840 |
| AEF85146.1 | trpA | TREPR_3600 | TREPR_0388 | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.812 |
| AEF85146.1 | trpB | TREPR_3600 | TREPR_0387 | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.812 |
| AEF86726.1 | AEF85146.1 | TREPR_3719 | TREPR_3600 | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | 0.909 |
| AEF86726.1 | AEF86864.1 | TREPR_3719 | TREPR_0456 | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.800 |
| AEF86726.1 | AEF86887.1 | TREPR_3719 | TREPR_1352 | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | Hypothetical protein; Identified by glimmer; putative. | 0.911 |
| AEF86726.1 | thrH | TREPR_3719 | TREPR_3042 | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR02137. | 0.840 |
| AEF86726.1 | trpA | TREPR_3719 | TREPR_0388 | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.812 |
| AEF86726.1 | trpB | TREPR_3719 | TREPR_0387 | Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.812 |
| AEF86864.1 | AEF84295.1 | TREPR_0456 | TREPR_0224 | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Identified by match to protein family HMM PF00903. | 0.800 |
| AEF86864.1 | AEF84332.1 | TREPR_0456 | TREPR_0455 | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Identified by match to protein family HMM PF01694. | 0.550 |
| AEF86864.1 | AEF85146.1 | TREPR_0456 | TREPR_3600 | Conserved hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Serine acetyltransferase, plasmid (SAT); Identified by match to protein family HMM PF00132. | 0.800 |
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