STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86930.1Sigma-54 factor interaction domain protein; Identified by match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF07728. (917 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor; Identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.
 
 
 
 0.977
AEF83994.1
Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255.
 
   
 0.935
AEF85529.1
PTS system, IIc component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.924
AEF84993.1
Cellobiose PTS system EIIB component; Identified by match to protein family HMM PF02302.
 
   
 0.918
AEF85383.1
Hypothetical protein; Identified by glimmer; putative.
   
 
 0.858
AEF86932.1
Transcriptional antiterminator, BglG; Identified by match to protein family HMM PF03123.
 
   
 0.735
AEF86142.1
Phage shock protein A, PspA; Identified by match to protein family HMM PF04012.
   
 
 0.730
AEF86306.1
Lecithin retinol acyltransferase (Phosphatidylcholine--retinol O-acyltransferase) (Phosphatidylcholine-retinol-O-acyltransferase).
   
 
 0.730
AEF86829.1
Hypothetical protein; Identified by glimmer; putative.
   
 
 0.730
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
 
  
 0.724
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.