STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86642.1Dipeptide transport ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (332 aa)    
Predicted Functional Partners:
AEF84278.1
Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.
    0.885
AEF85260.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
    0.824
AEF85868.1
Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005.
 
 
  
0.819
AEF84638.1
Putative uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
       0.773
AEF84734.1
Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
  
    0.747
AEF86664.1
Dipeptide transport system permease protein DppC; Identified by match to protein family HMM PF00528.
    0.712
AEF83881.1
Putative acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily; Identified by match to protein family HMM PF03417.
       0.697
AEF86072.1
Oligopeptide transport system permease protein OppC; Identified by match to protein family HMM PF00528.
    0.682
AEF83953.1
Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.
    0.672
AEF85232.1
Putative Xaa-Pro aminopeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321.
  
    0.659
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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