AEF84734.1 protein (Treponema primitia ZAS2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AEF84734.1

Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. (494 aa)

Predicted Functional Partners:

AEF85260.1

0.931

AEF84278.1

0.917

AEF84947.1

0.769

AEF86170.1

0.751

AEF86228.1

0.748

AEF86642.1

0.747

AEF84188.1

0.743

AEF85836.1

0.720

AEF85868.1

0.718

AEF86349.1

0.710

Your Current Organism:

Treponema primitia ZAS2

NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEF84188.1	AEF84278.1	TREPR_0703	TREPR_0478	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	0.846
AEF84188.1	AEF84734.1	TREPR_0703	TREPR_0480	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	0.743
AEF84188.1	AEF84947.1	TREPR_0703	TREPR_0704	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.964
AEF84188.1	AEF85836.1	TREPR_0703	TREPR_0826	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.846
AEF84188.1	AEF86170.1	TREPR_0703	TREPR_0935	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.848
AEF84188.1	AEF86228.1	TREPR_0703	TREPR_1334	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.823
AEF84188.1	AEF86349.1	TREPR_0703	TREPR_0673	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.846
AEF84278.1	AEF84188.1	TREPR_0478	TREPR_0703	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	0.846
AEF84278.1	AEF84734.1	TREPR_0478	TREPR_0480	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	0.917
AEF84278.1	AEF85260.1	TREPR_0478	TREPR_0479	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.964
AEF84278.1	AEF85868.1	TREPR_0478	TREPR_0476	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005.	0.862
AEF84278.1	AEF86642.1	TREPR_0478	TREPR_0477	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	Dipeptide transport ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.885
AEF84734.1	AEF84188.1	TREPR_0480	TREPR_0703	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528.	0.743
AEF84734.1	AEF84278.1	TREPR_0480	TREPR_0478	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.	0.917
AEF84734.1	AEF84947.1	TREPR_0480	TREPR_0704	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.769
AEF84734.1	AEF85260.1	TREPR_0480	TREPR_0479	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.931
AEF84734.1	AEF85836.1	TREPR_0480	TREPR_0826	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.720
AEF84734.1	AEF85868.1	TREPR_0480	TREPR_0476	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005.	0.718
AEF84734.1	AEF86170.1	TREPR_0480	TREPR_0935	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.	0.751
AEF84734.1	AEF86228.1	TREPR_0480	TREPR_1334	Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.748

page 1 of 4

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About