STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86563.1Cytoplasm protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (628 aa)    
Predicted Functional Partners:
AEF83557.1
Glycosyltransferase family 1, candidate beta-glycosyltransferase; Identified by match to protein family HMM PF03033.
 
     0.582
AEF85694.1
Glycosyltransferase family 1, candidate beta-glycosyltransferase; Identified by match to protein family HMM PF03033.
 
     0.540
AEF84569.1
Hypothetical protein; Identified by glimmer; putative.
       0.532
asd
Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
     0.513
AEF85118.1
Hypothetical protein; Identified by glimmer; putative.
       0.477
AEF85803.1
MmoS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF02743.
 
     0.471
rplQ
50S ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.
  
     0.441
AEF85912.1
PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
 
     0.434
AEF83972.1
Sensor protein GacS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02743; overlaps another CDS with the same product name.
  
  
 0.431
AEF85959.1
Hybrid sensory kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494.
 
     0.429
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.