Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84569.1 | AEF85118.1 | TREPR_0487 | TREPR_0488 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.742 |
| AEF84569.1 | AEF86563.1 | TREPR_0487 | TREPR_0485 | Hypothetical protein; Identified by glimmer; putative. | Cytoplasm protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.532 |
| AEF85118.1 | AEF84569.1 | TREPR_0488 | TREPR_0487 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.742 |
| AEF85118.1 | AEF85522.1 | TREPR_0488 | TREPR_0218 | Hypothetical protein; Identified by glimmer; putative. | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | 0.446 |
| AEF85118.1 | AEF86563.1 | TREPR_0488 | TREPR_0485 | Hypothetical protein; Identified by glimmer; putative. | Cytoplasm protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.477 |
| AEF85118.1 | efp | TREPR_0488 | TREPR_1457 | Hypothetical protein; Identified by glimmer; putative. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.779 |
| AEF85522.1 | AEF85118.1 | TREPR_0218 | TREPR_0488 | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | Hypothetical protein; Identified by glimmer; putative. | 0.446 |
| AEF85522.1 | efp | TREPR_0218 | TREPR_1457 | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.693 |
| AEF86563.1 | AEF84569.1 | TREPR_0485 | TREPR_0487 | Cytoplasm protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; Identified by glimmer; putative. | 0.532 |
| AEF86563.1 | AEF85118.1 | TREPR_0485 | TREPR_0488 | Cytoplasm protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; Identified by glimmer; putative. | 0.477 |
| efp | AEF85118.1 | TREPR_1457 | TREPR_0488 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Hypothetical protein; Identified by glimmer; putative. | 0.779 |
| efp | AEF85522.1 | TREPR_1457 | TREPR_0218 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | 0.693 |