STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84719.1Nitrogen fixation protein NifH/NifE; Identified by match to protein family HMM PF00142; match to protein family HMM PF00148; Belongs to the NifH/BchL/ChlL family. (733 aa)    
Predicted Functional Partners:
nifB
Nitrogenase cofactor biosynthesis protein NifB; Identified by match to protein family HMM PF02579; match to protein family HMM PF04055; match to protein family HMM TIGR01290.
 
  
 0.989
AEF85679.1
Oxidoreductase/nitrogenase, component 1; Identified by match to protein family HMM PF00148.
 
 
0.915
AEF84792.1
Putative oxidoreductase/nitrogenase, component 1; Identified by match to protein family HMM PF00148; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.867
AEF86322.1
Conserved hypothetical protein.
 
 
 0.846
AEF85928.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
     
 0.800
AEF86700.1
HmuU protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.793
AEF86810.1
Ferric enterobactin transport ATP-binding protein FepC; Identified by match to protein family HMM PF00005.
       0.792
AEF85470.1
Conserved hypothetical protein.
 
 
 0.783
amt
Ammonium transporter; Identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836.
  
  
 0.782
AEF85224.1
Putative vitamin B12 transporter BtuB (Cobalamin receptor) (Outermembrane cobalamin translocator); Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
       0.773
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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