STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85972.1Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883. (317 aa)    
Predicted Functional Partners:
AEF83925.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.
 
 
 0.823
AEF85050.1
methylphosphotriester-DNA alkyltransferase; Identified by match to protein family HMM PF00165; match to protein family HMM PF02805.
  
    0.631
AEF84457.1
Galactoside O-acetyltransferase; Identified by match to protein family HMM PF00132.
       0.487
AEF85086.1
Hypothetical protein; Identified by glimmer; putative.
       0.487
AEF86346.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
 
0.479
AEF86717.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
 
0.479
AEF86849.1
L-lysine 2,3-aminomutase (KAM) (LAM); Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238.
       0.471
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
   0.432
AEF86139.1
Putative peptidase, S24 family; Identified by match to protein family HMM PF00717.
   
   0.432
AEF86296.1
Pyrazinamidase/nicotinamidase (PZAase)(Nicotine deamidase) (NAMase); Identified by match to protein family HMM PF00857.
  
    0.423
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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