STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (392 aa)    
Predicted Functional Partners:
AEF84503.1
Spermidine/putrescine transport system permease protein PotB; Identified by match to protein family HMM PF00528.
 0.992
AEF85103.1
Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547.
 
 
 0.991
AEF83757.1
Spermidine/putrescine transport system permease protein PotC; Identified by match to protein family HMM PF00528.
 
 
 0.989
AEF86598.1
Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547.
 
 
 0.989
AEF85736.1
Spermidine/putrescine transport system permease protein PotB; Identified by match to protein family HMM PF00528.
 
 0.980
AEF85796.1
Ornithine carbamoyltransferase; Identified by match to protein family HMM PF00528.
 
 0.972
AEF86934.1
Spermidine/putrescine ABC transporter ATP-binding subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187; Belongs to the ABC transporter superfamily.
  
  
 
0.911
AEF86253.1
Spermidine/putrescine ABC transporter ATP-binding subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
  
 
0.908
AEF83583.1
PotB protein; Identified by match to protein family HMM PF00528.
 
 
 0.896
AEF84228.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.809
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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