Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84174.1 | AEF84930.1 | TREPR_0572 | TREPR_0571 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Cell wall hydrolase/autolysin. | 0.668 |
| AEF84174.1 | AEF86027.1 | TREPR_0572 | TREPR_3715 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Identified by match to protein family HMM PF02597. | 0.723 |
| AEF84174.1 | AEF86372.1 | TREPR_0572 | TREPR_0575 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Hypothetical protein; Identified by glimmer; putative. | 0.572 |
| AEF84174.1 | AEF86823.1 | TREPR_0572 | TREPR_0573 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Identified by match to protein family HMM PF00899. | 0.847 |
| AEF84174.1 | metG | TREPR_0572 | TREPR_1795 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.616 |
| AEF84174.1 | mfd | TREPR_0572 | TREPR_1911 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.611 |
| AEF84174.1 | pth | TREPR_0572 | TREPR_1967 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.614 |
| AEF84174.1 | rrmJ | TREPR_0572 | TREPR_0717 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.511 |
| AEF84174.1 | thiS | TREPR_0572 | TREPR_0257 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. | 0.736 |
| AEF84174.1 | trmB | TREPR_0572 | TREPR_2641 | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.480 |
| AEF84930.1 | AEF84174.1 | TREPR_0571 | TREPR_0572 | Cell wall hydrolase/autolysin. | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | 0.668 |
| AEF84930.1 | AEF86372.1 | TREPR_0571 | TREPR_0575 | Cell wall hydrolase/autolysin. | Hypothetical protein; Identified by glimmer; putative. | 0.500 |
| AEF84930.1 | AEF86823.1 | TREPR_0571 | TREPR_0573 | Cell wall hydrolase/autolysin. | Identified by match to protein family HMM PF00899. | 0.686 |
| AEF86027.1 | AEF84174.1 | TREPR_3715 | TREPR_0572 | Identified by match to protein family HMM PF02597. | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | 0.723 |
| AEF86027.1 | AEF86823.1 | TREPR_3715 | TREPR_0573 | Identified by match to protein family HMM PF02597. | Identified by match to protein family HMM PF00899. | 0.600 |
| AEF86027.1 | metG | TREPR_3715 | TREPR_1795 | Identified by match to protein family HMM PF02597. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.561 |
| AEF86027.1 | thiS | TREPR_3715 | TREPR_0257 | Identified by match to protein family HMM PF02597. | Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. | 0.947 |
| AEF86372.1 | AEF84174.1 | TREPR_0575 | TREPR_0572 | Hypothetical protein; Identified by glimmer; putative. | Adenine nucleotide alpha hydrolase ATP-binding family protein; Identified by match to protein family HMM PF01171; Belongs to the TtcA family. | 0.572 |
| AEF86372.1 | AEF84930.1 | TREPR_0575 | TREPR_0571 | Hypothetical protein; Identified by glimmer; putative. | Cell wall hydrolase/autolysin. | 0.500 |
| AEF86372.1 | AEF86823.1 | TREPR_0575 | TREPR_0573 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF00899. | 0.572 |
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