STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84238.1Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. (249 aa)    
Predicted Functional Partners:
AEF85083.1
Mannitol-1-phosphate/altronate dehydrogenase; Identified by match to protein family HMM PF08125.
 
   
 0.852
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.838
uxaC
Glucuronate isomerase; Identified by match to protein family HMM PF02614.
 
   
 0.635
AEF84157.1
Putative trap dicarboxylate transporter, dctp subunit; Identified by match to protein family HMM PF03480.
 
     0.635
AEF85962.1
Putative tripartite ATP-independent periplasmic transporter, DctQ component; Identified by match to protein family HMM PF04290.
 
     0.578
ilvN
Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119.
   
    0.559
AEF85604.1
Transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339.
  
  
 0.534
AEF86175.1
Trap dicarboxylate transporter, dctm subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786.
 
    0.512
AEF85644.1
Putative GntR domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.510
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.458
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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