STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85428.1Identified by match to protein family HMM PF03372. (408 aa)    
Predicted Functional Partners:
AEF86068.1
Identified by match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM TIGR01977.
    
   0.697
AEF84194.1
Probable cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.697
AEF84987.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.650
AEF83746.1
Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639.
  
     0.627
AEF86028.1
Conserved hypothetical protein.
  
    0.626
AEF84004.1
Identified by match to protein family HMM PF02325.
 
     0.604
AEF85558.1
Putative recombination protein O.
  
     0.575
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
  
  
 0.563
AEF84697.1
Putative phospholipid-binding domain family protein; Identified by match to protein family HMM PF04972.
       0.538
AEF85695.1
Putative lipoprotein.
  
     0.525
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.