Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF83543.1Bile acid:sodium symporter; Identified by match to protein family HMM PF01758. (329 aa)    
Predicted Functional Partners:
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
       0.551
AEF85694.1
Glycosyltransferase family 1, candidate beta-glycosyltransferase; Identified by match to protein family HMM PF03033.
       0.520
AEF86509.1
Putative Fe-S oxidoreductase; Identified by match to protein family HMM PF04055.
       0.520
AEF83557.1
Glycosyltransferase family 1, candidate beta-glycosyltransferase; Identified by match to protein family HMM PF03033.
       0.504
AEF84629.1
Cadmium efflux system accessory protein; Identified by match to protein family HMM PF01022.
 
  
 0.419
AEF83634.1
Probable NADPH:quinone oxidoreductase 2; Identified by match to protein family HMM PF03358.
     
 0.416
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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