STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85297.1Putative exopolyphosphatase; Identified by match to protein family HMM PF01966; match to protein family HMM PF02541. (512 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
 
 0.994
AEF84401.1
GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691.
  
 
 0.921
AEF86267.1
RelA/SpoT domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF04607; match to protein family HMM PF07719.
     
  0.900
AEF84654.1
RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.
     
  0.900
AEF86028.1
Conserved hypothetical protein.
       0.773
AEF85020.1
PUA domain protein; Identified by match to protein family HMM PF01170; match to protein family HMM PF03602; match to protein family HMM PF05175.
 
     0.739
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.503
AEF83645.1
Putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B); Identified by match to protein family HMM PF02637; match to protein family HMM PF02934.
       0.487
metG
methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.471
AEF87032.1
Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
     
 0.464
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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