Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84482.1 | AEF85121.1 | TREPR_0693 | TREPR_0692 | Conserved hypothetical protein. | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | 0.782 |
| AEF84482.1 | AEF85558.1 | TREPR_0693 | TREPR_1003 | Conserved hypothetical protein. | Putative recombination protein O. | 0.430 |
| AEF84482.1 | raiA | TREPR_0693 | TREPR_2729 | Conserved hypothetical protein. | Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741. | 0.492 |
| AEF84781.1 | AEF85121.1 | TREPR_1171 | TREPR_0692 | Putative fibronectin/fibrinogen-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833. | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | 0.489 |
| AEF84987.1 | AEF85121.1 | TREPR_3552 | TREPR_0692 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | 0.527 |
| AEF84987.1 | AEF85558.1 | TREPR_3552 | TREPR_1003 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative recombination protein O. | 0.771 |
| AEF84987.1 | AEF85696.1 | TREPR_3552 | TREPR_2725 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Identified by match to protein family HMM PF02878. | 0.772 |
| AEF84987.1 | cmk-2 | TREPR_3552 | TREPR_2412 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative cytidylate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR02173. | 0.746 |
| AEF84987.1 | holA | TREPR_3552 | TREPR_0682 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128. | 0.430 |
| AEF84987.1 | raiA | TREPR_3552 | TREPR_2729 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741. | 0.767 |
| AEF85121.1 | AEF84482.1 | TREPR_0692 | TREPR_0693 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Conserved hypothetical protein. | 0.782 |
| AEF85121.1 | AEF84781.1 | TREPR_0692 | TREPR_1171 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Putative fibronectin/fibrinogen-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833. | 0.489 |
| AEF85121.1 | AEF84987.1 | TREPR_0692 | TREPR_3552 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.527 |
| AEF85121.1 | AEF85558.1 | TREPR_0692 | TREPR_1003 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Putative recombination protein O. | 0.565 |
| AEF85121.1 | AEF85578.1 | TREPR_0692 | TREPR_0227 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Putative adenylosuccinate lyase; Identified by match to protein family HMM PF00206. | 0.450 |
| AEF85121.1 | AEF85696.1 | TREPR_0692 | TREPR_2725 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Identified by match to protein family HMM PF02878. | 0.459 |
| AEF85121.1 | cmk-2 | TREPR_0692 | TREPR_2412 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Putative cytidylate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR02173. | 0.582 |
| AEF85121.1 | holA | TREPR_0692 | TREPR_0682 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128. | 0.524 |
| AEF85121.1 | raiA | TREPR_0692 | TREPR_2729 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741. | 0.450 |
| AEF85121.1 | rnz | TREPR_0692 | TREPR_2505 | Metal dependent phosphohydrolase; Identified by match to protein family HMM PF01966. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.448 |
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