Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF84413.1Death-on-curing family protein. (187 aa)    
Predicted Functional Partners:
AEF86963.1
N-6 DNA methylase; Identified by match to protein family HMM PF01420; match to protein family HMM PF02384.
 
    0.908
AEF84895.1
N-6 DNA methylase; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
 
    0.902
AEF86090.1
Conserved hypothetical protein.
       0.778
AEF83689.1
Oxidoreductase; Identified by match to protein family HMM PF01408.
  
    0.776
AEF85850.1
HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.674
AEF83944.1
putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.674
AEF84230.1
Restriction modification system DNA specificity domain protein; Identified by match to protein family HMM PF01420.
 
    0.594
AEF84892.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
  
    0.563
AEF85171.1
Type I restriction modification system M subunit; Identified by match to protein family HMM PF02384.
  
    0.555
AEF86264.1
Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384.
  
    0.555
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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