Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83590.1 | AEF84570.1 | TREPR_0715 | TREPR_0714 | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | LysM domain/M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | 0.661 |
| AEF83590.1 | AEF85699.1 | TREPR_0715 | TREPR_1826 | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | Putative AAA ATPase; Identified by match to protein family HMM PF00004. | 0.553 |
| AEF83590.1 | AEF86106.1 | TREPR_0715 | TREPR_0716 | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.790 |
| AEF83590.1 | rrmJ | TREPR_0715 | TREPR_0717 | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.549 |
| AEF84570.1 | AEF83590.1 | TREPR_0714 | TREPR_0715 | LysM domain/M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | 0.661 |
| AEF84570.1 | AEF86106.1 | TREPR_0714 | TREPR_0716 | LysM domain/M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.655 |
| AEF84570.1 | rrmJ | TREPR_0714 | TREPR_0717 | LysM domain/M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.489 |
| AEF85699.1 | AEF83590.1 | TREPR_1826 | TREPR_0715 | Putative AAA ATPase; Identified by match to protein family HMM PF00004. | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | 0.553 |
| AEF86106.1 | AEF83590.1 | TREPR_0716 | TREPR_0715 | Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | 0.790 |
| AEF86106.1 | AEF84570.1 | TREPR_0716 | TREPR_0714 | Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | LysM domain/M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | 0.655 |
| AEF86106.1 | rrmJ | TREPR_0716 | TREPR_0717 | Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.702 |
| rrmJ | AEF83590.1 | TREPR_0717 | TREPR_0715 | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Conserved hypothetical protein; Identified by match to protein family HMM PF02151; match to protein family HMM PF02577. | 0.549 |
| rrmJ | AEF84570.1 | TREPR_0717 | TREPR_0714 | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | LysM domain/M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | 0.489 |
| rrmJ | AEF86106.1 | TREPR_0717 | TREPR_0716 | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.702 |