STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84601.1Aldo/keto reductase; Identified by match to protein family HMM PF00248. (255 aa)    
Predicted Functional Partners:
AEF85591.1
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase); Identified by match to protein family HMM PF01979.
     
 0.790
AEF83628.1
Putative creatininase; Identified by match to protein family HMM PF02633.
       0.774
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
  
 0.716
AEF86550.1
Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.
  
    0.638
AEF85998.1
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
       0.593
AEF86685.1
Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
       0.593
AEF84598.1
IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324.
  
 
 0.490
AEF84968.1
Peptidyl-prolyl cis-trans isomerase; Identified by match to protein family HMM PF00160; match to protein family HMM PF00254.
   
 
 0.474
AEF86428.1
Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
  
    0.472
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.457
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.