STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85998.1Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (229 aa)    
Predicted Functional Partners:
AEF86685.1
Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
 0.997
AEF86550.1
Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.
   0.995
AEF84894.1
Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497.
   0.923
AEF85309.1
Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
   0.911
AEF83763.1
Identified by match to protein family HMM PF00005.
 
 0.908
AEF86339.1
Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
 
 0.905
AEF85497.1
L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005.
 
 0.905
AEF86145.1
Identified by match to protein family HMM PF00005.
 
 0.902
AEF84247.1
L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005.
 
 0.901
AEF85700.1
L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005.
 
 0.901
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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