STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83816.1Conserved hypothetical protein. (66 aa)    
Predicted Functional Partners:
AEF84572.1
DNA polymerase, beta domain protein region; Identified by match to protein family HMM PF01909.
       0.625
AEF86044.1
Identified by match to protein family HMM PF02082.
       0.544
AEF86553.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08922.
       0.542
AEF84494.1
PIN domain protein.
  
     0.445
AEF84556.1
PIN domain protein; Identified by match to protein family HMM PF01850.
  
     0.444
AEF86281.1
Identified by match to protein family HMM PF01850.
  
     0.427
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.