STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86154.1Methyltransferase MtaA/CmuA family; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. (342 aa)    
Predicted Functional Partners:
AEF86168.1
Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607.
 
 0.985
AEF85409.1
Conserved hypothetical protein.
 
     0.835
AEF83883.1
Uroporphyrinogen decarboxylase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
    
0.766
AEF86821.1
Putative veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.680
AEF86670.1
Veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.676
AEF87044.1
Conserved hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.658
AEF84759.1
Putative veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.656
AEF85625.1
Putative veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.603
AEF84592.1
Ferredoxin; Identified by match to protein family HMM PF00111.
 
    0.591
AEF85679.1
Oxidoreductase/nitrogenase, component 1; Identified by match to protein family HMM PF00148.
  
     0.552
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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