STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84358.1Band 7 protein. (332 aa)    
Predicted Functional Partners:
AEF84633.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01957.
 
  
 0.985
AEF86705.1
Conserved hypothetical protein.
       0.773
AEF85456.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
   
    0.563
AEF86168.1
Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607.
       0.453
AEF83883.1
Uroporphyrinogen decarboxylase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
       0.453
AEF86154.1
Methyltransferase MtaA/CmuA family; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
       0.400
AEF85409.1
Conserved hypothetical protein.
       0.400
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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