Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF86231.1Conserved hypothetical protein. (202 aa)    
Predicted Functional Partners:
AEF85557.1
Conserved hypothetical protein.
  
     0.760
AEF85181.1
Conserved hypothetical protein.
  
     0.751
AEF85534.1
Conserved hypothetical protein.
  
     0.749
AEF85656.1
Conserved hypothetical protein.
  
     0.731
AEF84883.1
Conserved hypothetical protein.
  
     0.717
AEF85452.1
Conserved hypothetical protein.
  
     0.706
AEF84532.1
Conserved domain protein; Identified by match to protein family HMM PF07927.
  
     0.667
AEF85843.1
Conserved domain protein; Identified by match to protein family HMM PF07927.
  
     0.663
AEF86654.1
Conserved domain protein.
  
     0.648
AEF84799.1
Conserved hypothetical protein.
  
     0.642
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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