Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83753.1 | AEF83942.1 | TREPR_0064 | TREPR_2225 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Anti-sigma F factor antagonist; Identified by match to protein family HMM PF01740. | 0.463 |
| AEF83753.1 | AEF85081.1 | TREPR_0064 | TREPR_0688 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.659 |
| AEF83753.1 | AEF85403.1 | TREPR_0064 | TREPR_2296 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Conserved hypothetical protein. | 0.519 |
| AEF83753.1 | AEF85865.1 | TREPR_0064 | TREPR_0796 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | ABC transporter permease protein; Identified by match to protein family HMM PF02405. | 0.735 |
| AEF83753.1 | AEF85932.1 | TREPR_0064 | TREPR_1642 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Identified by match to protein family HMM PF00691. | 0.689 |
| AEF83753.1 | AEF86659.1 | TREPR_0064 | TREPR_0794 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Identified by match to protein family HMM PF02470. | 0.793 |
| AEF83753.1 | AEF86875.1 | TREPR_0064 | TREPR_0075 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Tetratricopeptide repeat domain protein. | 0.708 |
| AEF83942.1 | AEF83753.1 | TREPR_2225 | TREPR_0064 | Anti-sigma F factor antagonist; Identified by match to protein family HMM PF01740. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.463 |
| AEF83942.1 | AEF85865.1 | TREPR_2225 | TREPR_0796 | Anti-sigma F factor antagonist; Identified by match to protein family HMM PF01740. | ABC transporter permease protein; Identified by match to protein family HMM PF02405. | 0.735 |
| AEF83942.1 | AEF86659.1 | TREPR_2225 | TREPR_0794 | Anti-sigma F factor antagonist; Identified by match to protein family HMM PF01740. | Identified by match to protein family HMM PF02470. | 0.741 |
| AEF84139.1 | AEF85865.1 | TREPR_0795 | TREPR_0796 | Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter permease protein; Identified by match to protein family HMM PF02405. | 0.961 |
| AEF84139.1 | AEF86542.1 | TREPR_0795 | TREPR_0793 | Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Tetratricopeptide repeat domain protein. | 0.739 |
| AEF84139.1 | AEF86659.1 | TREPR_0795 | TREPR_0794 | Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Identified by match to protein family HMM PF02470. | 0.966 |
| AEF84385.1 | AEF85932.1 | TREPR_2860 | TREPR_1642 | Chemotaxis protein MotB; Identified by match to protein family HMM PF00691. | Identified by match to protein family HMM PF00691. | 0.504 |
| AEF84385.1 | AEF86659.1 | TREPR_2860 | TREPR_0794 | Chemotaxis protein MotB; Identified by match to protein family HMM PF00691. | Identified by match to protein family HMM PF02470. | 0.741 |
| AEF85081.1 | AEF83753.1 | TREPR_0688 | TREPR_0064 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.659 |
| AEF85081.1 | AEF85865.1 | TREPR_0688 | TREPR_0796 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | ABC transporter permease protein; Identified by match to protein family HMM PF02405. | 0.735 |
| AEF85081.1 | AEF86659.1 | TREPR_0688 | TREPR_0794 | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | Identified by match to protein family HMM PF02470. | 0.741 |
| AEF85403.1 | AEF83753.1 | TREPR_2296 | TREPR_0064 | Conserved hypothetical protein. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.519 |
| AEF85403.1 | AEF85865.1 | TREPR_2296 | TREPR_0796 | Conserved hypothetical protein. | ABC transporter permease protein; Identified by match to protein family HMM PF02405. | 0.431 |
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