STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85865.1ABC transporter permease protein; Identified by match to protein family HMM PF02405. (256 aa)    
Predicted Functional Partners:
AEF86659.1
Identified by match to protein family HMM PF02470.
 
 0.998
AEF84139.1
Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
  0.961
AEF86542.1
Tetratricopeptide repeat domain protein.
       0.744
AEF83753.1
Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.
   
   0.735
AEF85081.1
Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.
   
   0.735
AEF83942.1
Anti-sigma F factor antagonist; Identified by match to protein family HMM PF01740.
   
   0.735
AEF87033.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  
  0.732
AEF83837.1
Glyoxalase domain protein; Identified by match to protein family HMM PF00903.
       0.682
AEF83769.1
Biopolymer transport protein; Identified by match to protein family HMM PF01618.
  
   
 0.673
yaeT
Outer membrane protein assembly complex, YaeT protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM PF08479; match to protein family HMM TIGR03303.
 
     0.626
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.