STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83947.1Conserved domain protein; Identified by match to protein family HMM PF01371. (103 aa)    
Predicted Functional Partners:
AEF84938.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296.
       0.668
AEF86256.1
Conserved hypothetical protein.
  
     0.565
AEF84020.1
Conserved hypothetical protein.
  
     0.537
AEF85188.1
Conserved hypothetical protein.
  
     0.530
AEF86863.1
RNA methyltransferase superfamily; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
     0.499
AEF87020.1
Branched-chain amino acid transport; Identified by match to protein family HMM PF05437.
       0.481
AEF83605.1
Branched-chain amino acid transport protein AzlC; Identified by match to protein family HMM PF03591.
       0.481
AEF85038.1
Histidine biosynthesis bifunctional protein hisIE; Identified by match to protein family HMM PF00977; match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; Belongs to the HisA/HisF family.
     
 0.462
AEF86659.1
Identified by match to protein family HMM PF02470.
 
     0.456
AEF83638.1
Conserved hypothetical protein.
  
     0.436
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.