STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86507.1Methyltransferase type 12; Identified by match to protein family HMM PF02353; match to protein family HMM PF07021; match to protein family HMM PF08241; match to protein family HMM PF08242. (294 aa)    
Predicted Functional Partners:
AEF84559.1
Hypothetical protein; Identified by glimmer; putative.
   
   0.825
AEF85607.1
Hypothetical protein; Identified by glimmer; putative.
       0.815
AEF85932.1
Identified by match to protein family HMM PF00691.
 
   
 0.537
AEF84981.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
    0.517
AEF84743.1
Conserved hypothetical protein.
 
 
 
 0.488
AEF86140.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02922.
  
    0.454
AEF83788.1
Identified by match to protein family HMM PF01071; match to protein family HMM PF02655.
 
  
 0.435
AEF83778.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF04471; match to protein family HMM PF07719; match to protein family HMM PF07720.
 
     0.420
AEF83563.1
Conserved hypothetical protein.
  
     0.417
AEF86996.1
Identified by match to protein family HMM PF00691.
 
   
 0.413
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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