STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85035.1Hypothetical protein; Identified by glimmer; putative. (557 aa)    
Predicted Functional Partners:
AEF83599.1
ATPase, AAA family; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
 
     0.800
AEF86583.1
Small ribosomal subunit Rsm22 family; Identified by match to protein family HMM PF09243.
 
     0.592
AEF84466.1
Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596.
  
     0.553
AEF86613.1
Methyltransferase.
  
     0.435
AEF86693.1
Conserved hypothetical protein.
  
     0.434
AEF86083.1
Conserved hypothetical protein.
  
     0.423
AEF85453.1
HTH domain protein; Identified by match to protein family HMM PF08279.
       0.416
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.