STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85818.1Type I restriction-modification system R subunit; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851. (1131 aa)    
Predicted Functional Partners:
AEF86963.1
N-6 DNA methylase; Identified by match to protein family HMM PF01420; match to protein family HMM PF02384.
 
 
 0.977
AEF84895.1
N-6 DNA methylase; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
 
 
 0.971
AEF85171.1
Type I restriction modification system M subunit; Identified by match to protein family HMM PF02384.
 
 
 0.931
AEF84320.1
Type I site-specific deoxyribonuclease; Identified by match to protein family HMM PF01420.
 
 
 0.920
AEF86822.1
Type I restriction-modification system S subunit; Identified by match to protein family HMM PF01420.
 
 
 0.898
AEF85075.1
Integrase/recombinase, phage integrase family; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
 
     0.601
AEF84892.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
 
 
 0.578
AEF84099.1
Dna methylase-type I restriction-modification system.
 
 
 0.517
AEF86264.1
Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384.
  
 
 0.511
AEF86250.1
putatIve type i restriction enzyme hindviip m protein (m.hindviip); Identified by match to protein family HMM PF02384.
  
 
 0.511
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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