Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83755.1 | AEF84590.1 | TREPR_0841 | TREPR_0844 | Putative lipoprotein. | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | 0.642 |
| AEF83755.1 | AEF85938.1 | TREPR_0841 | TREPR_0840 | Putative lipoprotein. | Radical SAM; Identified by match to protein family HMM PF04055. | 0.474 |
| AEF83755.1 | AEF86515.1 | TREPR_0841 | TREPR_0842 | Putative lipoprotein. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF83755.1 | AEF86627.1 | TREPR_0841 | TREPR_0839 | Putative lipoprotein. | 5 nucleotidase, deoxy, cytosolic type C; Identified by match to protein family HMM PF06941. | 0.474 |
| AEF84590.1 | AEF83755.1 | TREPR_0844 | TREPR_0841 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | Putative lipoprotein. | 0.642 |
| AEF84590.1 | AEF85938.1 | TREPR_0844 | TREPR_0840 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | Radical SAM; Identified by match to protein family HMM PF04055. | 0.404 |
| AEF84590.1 | AEF86441.1 | TREPR_0844 | TREPR_3836 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | Lipoate-protein ligase A (Lipoate--protein ligase); Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545. | 0.900 |
| AEF84590.1 | AEF86515.1 | TREPR_0844 | TREPR_0842 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | Hypothetical protein; Identified by glimmer; putative. | 0.642 |
| AEF84590.1 | AEF86627.1 | TREPR_0844 | TREPR_0839 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | 5 nucleotidase, deoxy, cytosolic type C; Identified by match to protein family HMM PF06941. | 0.404 |
| AEF84590.1 | fabF | TREPR_0844 | TREPR_1277 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.901 |
| AEF84590.1 | ilvN | TREPR_0844 | TREPR_0983 | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119. | 0.449 |
| AEF85938.1 | AEF83755.1 | TREPR_0840 | TREPR_0841 | Radical SAM; Identified by match to protein family HMM PF04055. | Putative lipoprotein. | 0.474 |
| AEF85938.1 | AEF84590.1 | TREPR_0840 | TREPR_0844 | Radical SAM; Identified by match to protein family HMM PF04055. | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | 0.404 |
| AEF85938.1 | AEF86515.1 | TREPR_0840 | TREPR_0842 | Radical SAM; Identified by match to protein family HMM PF04055. | Hypothetical protein; Identified by glimmer; putative. | 0.474 |
| AEF85938.1 | AEF86627.1 | TREPR_0840 | TREPR_0839 | Radical SAM; Identified by match to protein family HMM PF04055. | 5 nucleotidase, deoxy, cytosolic type C; Identified by match to protein family HMM PF06941. | 0.773 |
| AEF86441.1 | AEF84590.1 | TREPR_3836 | TREPR_0844 | Lipoate-protein ligase A (Lipoate--protein ligase); Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545. | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | 0.900 |
| AEF86515.1 | AEF83755.1 | TREPR_0842 | TREPR_0841 | Hypothetical protein; Identified by glimmer; putative. | Putative lipoprotein. | 0.773 |
| AEF86515.1 | AEF84590.1 | TREPR_0842 | TREPR_0844 | Hypothetical protein; Identified by glimmer; putative. | Putative acyl-ACP thioesterase superfamily; Identified by match to protein family HMM PF01643. | 0.642 |
| AEF86515.1 | AEF85938.1 | TREPR_0842 | TREPR_0840 | Hypothetical protein; Identified by glimmer; putative. | Radical SAM; Identified by match to protein family HMM PF04055. | 0.474 |
| AEF86515.1 | AEF86627.1 | TREPR_0842 | TREPR_0839 | Hypothetical protein; Identified by glimmer; putative. | 5 nucleotidase, deoxy, cytosolic type C; Identified by match to protein family HMM PF06941. | 0.474 |
page 1 of 2