STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85317.1Helix-turn-helix domain protein; Identified by match to protein family HMM PF01381. (173 aa)    
Predicted Functional Partners:
AEF86306.1
Lecithin retinol acyltransferase (Phosphatidylcholine--retinol O-acyltransferase) (Phosphatidylcholine-retinol-O-acyltransferase).
 
     0.804
AEF84562.1
Hypothetical protein; Identified by glimmer; putative.
       0.746
AEF83817.1
Hypothetical protein; Identified by glimmer; putative.
       0.746
AEF86092.1
Hypothetical protein; Identified by glimmer; putative.
       0.628
AEF85110.1
Hypothetical protein; Identified by glimmer; putative.
       0.628
AEF85984.1
Identified by match to protein family HMM PF03747.
 
   
 0.544
AEF86547.1
Hypothetical protein; Identified by glimmer; putative.
       0.504
AEF85888.1
Hypothetical protein; Identified by glimmer; putative.
       0.504
AEF86652.1
Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
     
 0.411
AEF85397.1
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.
 
     0.402
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.