Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83849.1 | AEF84304.1 | TREPR_3028 | TREPR_0936 | Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.678 |
| AEF83849.1 | AEF86170.1 | TREPR_3028 | TREPR_0935 | Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.847 |
| AEF84188.1 | AEF84304.1 | TREPR_0703 | TREPR_0936 | Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.755 |
| AEF84188.1 | AEF86170.1 | TREPR_0703 | TREPR_0935 | Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.848 |
| AEF84203.1 | AEF84304.1 | TREPR_0825 | TREPR_0936 | Oligopeptide transport system permease protein OppB; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.617 |
| AEF84203.1 | AEF86170.1 | TREPR_0825 | TREPR_0935 | Oligopeptide transport system permease protein OppB; Identified by match to protein family HMM PF00528. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.844 |
| AEF84304.1 | AEF83849.1 | TREPR_0936 | TREPR_3028 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528. | 0.678 |
| AEF84304.1 | AEF84188.1 | TREPR_0936 | TREPR_0703 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Inner membrane ABC transporter permease protein YddR; Identified by match to protein family HMM PF00528. | 0.755 |
| AEF84304.1 | AEF84203.1 | TREPR_0936 | TREPR_0825 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Oligopeptide transport system permease protein OppB; Identified by match to protein family HMM PF00528. | 0.617 |
| AEF84304.1 | AEF85260.1 | TREPR_0936 | TREPR_0479 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.760 |
| AEF84304.1 | AEF85384.1 | TREPR_0936 | TREPR_0672 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528. | 0.622 |
| AEF84304.1 | AEF85418.1 | TREPR_0936 | TREPR_0934 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84304.1 | AEF85934.1 | TREPR_0936 | TREPR_1376 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528. | 0.651 |
| AEF84304.1 | AEF86170.1 | TREPR_0936 | TREPR_0935 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.900 |
| AEF84304.1 | AEF86901.1 | TREPR_0936 | TREPR_2431 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.655 |
| AEF84304.1 | gsiC | TREPR_0936 | TREPR_1956 | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Glutathione ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.654 |
| AEF85260.1 | AEF84304.1 | TREPR_0479 | TREPR_0936 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.760 |
| AEF85260.1 | AEF86170.1 | TREPR_0479 | TREPR_0935 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.847 |
| AEF85384.1 | AEF84304.1 | TREPR_0672 | TREPR_0936 | Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.622 |
| AEF85384.1 | AEF86170.1 | TREPR_0672 | TREPR_0935 | Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.848 |
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