STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85068.1Putative peptidase M24; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321. (374 aa)    
Predicted Functional Partners:
AEF85165.1
Peptidase, M24 family; Identified by match to protein family HMM PF00557.
  
     0.762
AEF85053.1
Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
     
 0.756
AEF85849.1
Probable L-aspartate dehydrogenase; Identified by match to protein family HMM PF01408; match to protein family HMM PF01958; match to protein family HMM PF03447.
       0.742
AEF86087.1
Xaa-Pro aminopeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321.
  
     0.630
AEF84304.1
Putative bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
       0.536
AEF86170.1
Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.
  
    0.437
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
 
  
 0.428
AEF85418.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
     
 0.423
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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