Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83763.1 | AEF83834.1 | TREPR_0953 | TREPR_0957 | Identified by match to protein family HMM PF00005. | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.511 |
| AEF83763.1 | AEF84136.1 | TREPR_0953 | TREPR_0952 | Identified by match to protein family HMM PF00005. | Identified by match to protein family HMM PF01909. | 0.586 |
| AEF83763.1 | AEF84735.1 | TREPR_0953 | TREPR_0956 | Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.536 |
| AEF83763.1 | AEF84861.1 | TREPR_0953 | TREPR_0951 | Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by glimmer; putative. | 0.586 |
| AEF83763.1 | AEF85309.1 | TREPR_0953 | TREPR_0955 | Identified by match to protein family HMM PF00005. | Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.992 |
| AEF83763.1 | AEF86222.1 | TREPR_0953 | TREPR_0954 | Identified by match to protein family HMM PF00005. | L-cystine transport system permease protein TcyB; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.996 |
| AEF83834.1 | AEF83763.1 | TREPR_0957 | TREPR_0953 | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Identified by match to protein family HMM PF00005. | 0.511 |
| AEF83834.1 | AEF84136.1 | TREPR_0957 | TREPR_0952 | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Identified by match to protein family HMM PF01909. | 0.412 |
| AEF83834.1 | AEF84735.1 | TREPR_0957 | TREPR_0956 | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Conserved hypothetical protein. | 0.762 |
| AEF83834.1 | AEF84861.1 | TREPR_0957 | TREPR_0951 | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Identified by glimmer; putative. | 0.400 |
| AEF83834.1 | AEF85309.1 | TREPR_0957 | TREPR_0955 | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.557 |
| AEF83834.1 | AEF86222.1 | TREPR_0957 | TREPR_0954 | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | L-cystine transport system permease protein TcyB; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.550 |
| AEF84136.1 | AEF83763.1 | TREPR_0952 | TREPR_0953 | Identified by match to protein family HMM PF01909. | Identified by match to protein family HMM PF00005. | 0.586 |
| AEF84136.1 | AEF83834.1 | TREPR_0952 | TREPR_0957 | Identified by match to protein family HMM PF01909. | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.412 |
| AEF84136.1 | AEF84735.1 | TREPR_0952 | TREPR_0956 | Identified by match to protein family HMM PF01909. | Conserved hypothetical protein. | 0.405 |
| AEF84136.1 | AEF84861.1 | TREPR_0952 | TREPR_0951 | Identified by match to protein family HMM PF01909. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84136.1 | AEF85309.1 | TREPR_0952 | TREPR_0955 | Identified by match to protein family HMM PF01909. | Extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.544 |
| AEF84136.1 | AEF86222.1 | TREPR_0952 | TREPR_0954 | Identified by match to protein family HMM PF01909. | L-cystine transport system permease protein TcyB; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.544 |
| AEF84735.1 | AEF83763.1 | TREPR_0956 | TREPR_0953 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00005. | 0.536 |
| AEF84735.1 | AEF83834.1 | TREPR_0956 | TREPR_0957 | Conserved hypothetical protein. | Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.762 |
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