Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF85051.1PTS system IIA component, fructose subfamily; Identified by match to protein family HMM PF00359. (161 aa)    
Predicted Functional Partners:
AEF86444.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07929.
       0.773
AEF86116.1
PTS system, IIA component; Identified by match to protein family HMM PF00359.
  
     0.770
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
 
  
 0.696
AEF85941.1
Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF00359.
  
  
 0.647
AEF86442.1
Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00851.
  
  
 0.647
pfkB
1-phosphofructokinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.642
AEF83834.1
Anaerobic dimethylsulfoxide reductase, A subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR02166; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.636
AEF84735.1
Conserved hypothetical protein.
       0.628
AEF84529.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03668.
  
  
 0.560
AEF86222.1
L-cystine transport system permease protein TcyB; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
    0.463
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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