Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF84234.1 | AEF84866.1 | TREPR_0973 | TREPR_0970 | Amidohydrolase family protein. | Identified by match to protein family HMM PF02554. | 0.534 |
AEF84234.1 | AEF85572.1 | TREPR_0973 | TREPR_0972 | Amidohydrolase family protein. | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.786 |
AEF84234.1 | AEF85761.1 | TREPR_0973 | TREPR_0971 | Amidohydrolase family protein. | Conserved hypothetical protein. | 0.793 |
AEF84234.1 | AEF85912.1 | TREPR_0973 | TREPR_0969 | Amidohydrolase family protein. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.541 |
AEF84866.1 | AEF84234.1 | TREPR_0970 | TREPR_0973 | Identified by match to protein family HMM PF02554. | Amidohydrolase family protein. | 0.534 |
AEF84866.1 | AEF85572.1 | TREPR_0970 | TREPR_0972 | Identified by match to protein family HMM PF02554. | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.534 |
AEF84866.1 | AEF85761.1 | TREPR_0970 | TREPR_0971 | Identified by match to protein family HMM PF02554. | Conserved hypothetical protein. | 0.552 |
AEF84866.1 | AEF85912.1 | TREPR_0970 | TREPR_0969 | Identified by match to protein family HMM PF02554. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.794 |
AEF85572.1 | AEF84234.1 | TREPR_0972 | TREPR_0973 | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Amidohydrolase family protein. | 0.786 |
AEF85572.1 | AEF84866.1 | TREPR_0972 | TREPR_0970 | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Identified by match to protein family HMM PF02554. | 0.534 |
AEF85572.1 | AEF85761.1 | TREPR_0972 | TREPR_0971 | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Conserved hypothetical protein. | 0.981 |
AEF85572.1 | AEF85912.1 | TREPR_0972 | TREPR_0969 | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.535 |
AEF85572.1 | raiA | TREPR_0972 | TREPR_2729 | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741. | 0.653 |
AEF85761.1 | AEF84234.1 | TREPR_0971 | TREPR_0973 | Conserved hypothetical protein. | Amidohydrolase family protein. | 0.793 |
AEF85761.1 | AEF84866.1 | TREPR_0971 | TREPR_0970 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02554. | 0.552 |
AEF85761.1 | AEF85572.1 | TREPR_0971 | TREPR_0972 | Conserved hypothetical protein. | Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.981 |
AEF85761.1 | AEF85912.1 | TREPR_0971 | TREPR_0969 | Conserved hypothetical protein. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.535 |
AEF85761.1 | pheT | TREPR_0971 | TREPR_0483 | Conserved hypothetical protein. | phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF03484; match to protein family HMM TIGR00471. | 0.426 |
AEF85761.1 | raiA | TREPR_0971 | TREPR_2729 | Conserved hypothetical protein. | Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741. | 0.617 |
AEF85761.1 | rnfB | TREPR_0971 | TREPR_0305 | Conserved hypothetical protein. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.502 |
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